Plant GARDEN How To ▶︎

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Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015881495.1_cds_XP_016437802.1_33525

CDS Infomation

[gene=LOC107763815] [db_xref=GeneID:107763815] [protein=DNA mismatch repair protein MSH5-like isoform X6] [protein_id=XP_016437802.1] [location=complement(join(29806..29892,29991..30106,30653..30676,30749..30780,33495..33580,33679..33732,35099..35160,35523..35584,35880..35966,36160..36236,37926..37984,38073..38137,38246..38335,38425..38521,38774..38873,38960..39033,40102..40183,40276..40326,40432..40509,43118..43162,43265..43366,43920..43976,44629..44715,44946..45003,45093..45124,45227..45254,45324..45425,45555..45709,48004..48067,48361..48433,48510..48516,48872..48949))] [gbkey=CDS]

Sequence

ATGATGCCAGTATACGCCAACTCCACGTACTGGAAATCTGGGAAGATGGGAGTCATGACT
TTTCCTTGGTTGATATGGAGAAGTGATGGTACAAGTGACGCTCCTTCTGTAAAGCTTGTT
AAAAGTTCGCTATTCAGCCATGAGCAAGCATGGCACAGATTGATGTACCTTCAAGTCACT
GGGATGGATGATGGTTTGAACATAAAAGAGAGAACTGCTTTTCTAAGTTCTATGATGGAC
GTCAGCAGCGATGTTCAAATTCGTGCAAGTGGGGGCCTTTTAGCTGTGCTGGAGAATGAG
CGGATCATAGACACCCTTGAACTAAATGAAAGTGGGAGTGCATCAATTGCAATTGATTGC
ATCTGTGAAATTTCGCTTGACAAATTTCTCAAAGTTGATTCAGCTGCTCATGAAGCATTA
CAAATATTCCAAATAGACAAGCATCCTAGCCATATGGGGATAGGCAGATCAAAAGAAGGG
TTCTCTGTATTTGGGACGATGAATAAGTGCGTAACTCCAATGGGTAGACGTCTCTTGAGG
AGCTGGTTTCTGAGGCCTATATTGGATCTAGATAACCTGAATCGGCGTCTTGACACTATA
TCGTTCTTCCTGTCTGCTGAAGAAATTGCAGTCTCTTTACGCGAAACACTGAAGTCTGTA
AAAGATATTTCCTGCATACTCAAGAAATTTAACTCTCCAAGTTCTATATCTACAAGTGCA
GACTGGGCTGCTTTTCTGAAGAGTGTTTGTGCTCTCCTGCATATCAGCAAAATATTCGAA
GTAGGCATTTCTGGATCTCTGTACGAGGAATTGAAGAATTTGGACTTGGATATTATTGAG
AGGGCTGATTTTCACATTTCAGTCGATCTAGCCTATGTCTGTGAATTGGTAATTGGCGTG
ACTGATGTTGATAGAAGTAAAGAGAAGGGTTATGAGACAATAGTAAAAGAAGGTTTTTGT
GATGAGTTGGATGAGCTGAGGCAGATATATGAGGGATTGCCAGAATTTCTGGGGGAGGTT
TCGGCCTTGGAACTTGCACGACTTCCTCACATGTGTAGAGACAAGGAGATCCCTTCTATC
ATTTACATACATCAGATAGGTTACTTAATGTGCATTTTCAATGAAAAACTCGATGAAGAA
ATGCTAGAGAAGCTTCAGGACTATGAGTTTGCTTTTGCTGATGAGGAGGGAGAAAATGGG
AGGTTCTTTTATCATACTGCAAAGACAAGAGAATTGGATAACCTTCTCGGAGATATATAT
CATAAAATCCTTGATATGGAGAGAGCTATTATGAGGGACCTAGTGTCACATATTCTTCAG
CTCTCAGTGCATGTGAACAAGGCTGTTAATTTTGCAGCTGAGCTTGACTGTATTTTAGCG
TTAGCCTTGGTTGCACGTCAGAACAACTATGTAAGGCCAAATTTGACTAAAGAAGACGTG
ATTGATATAAGGAATGGAAGACATGTTTTGCAGGAGATAACAGTAGGCACATTTATTCCC
AACGACACAAAAGTTTCTCATGAAGGAAGAATTAATATCATCACAGGCCCTAATTATTCA
GGCAAAAGCATCTATATCAAGCAGGTTGCGTTGATAGTTTTCCTTTCCCACATTGGAAGT
TTTGTACCAGCAGATGCTGCCACAGTGGGTTTAACTGACAGGATATTTTGTGCCATGGGA
AGTAAGTTTATGACTGCTGAACAATCAACATTTATGATTGACCTGCACCAAGTGGGAATG
ATGTTAAGGCATGCAAGTCCTCGGTCCTTATGTTTGCTGGATGAGTTTGGTAAAGGCACC
CTTACAGAAGATGGTATCGGTCTCCTTGGTGGAACCATAAATCACTTTGTGTCATGCTAT
GACCCTCCAAAGGTCCTGGTCTGTACTCACTTGACAGAGATATTTGATAATAGTTGTTTA
TTGGAGTCAGACAGAATCAAGTGTTACACGATGAGCGTGCTAAGCCCGGATAAAGATTGT
GCAGATGTTGAAGACATCGTATTTCTCTATAGGTTGGTCCCAGGACGTGCCTTCCTTAGC
TATGGGTTGCACTGTGCCCAGCTAGCTGGATTACCTCACGAAGTTCTAAAGCGAGCAGCA
TTAATATTGGATACTCTCAAGAATGACAACCAAATTGAGAGACTTCGCAGGGATAATGTA
ATAGCTCGTGATCAGCAGTACAAGGATGCAGTGGAGAAGTTCCTAGCGTTTGATGCTCGG
AAAGGTGATCTGCTCCAGTTCTTTGAAGAGATCTTTCCTACCCAATCCTAA

Peptide Sequence

PEP ID

XP_016437802.1

PEP Infomation

PREDICTED: DNA mismatch repair protein MSH5-like isoform X6 [Nicotiana tabacum]

Sequence

MMPVYANSTYWKSGKMGVMTFPWLIWRSDGTSDAPSVKLVKSSLFSHEQAWHRLMYLQVT
GMDDGLNIKERTAFLSSMMDVSSDVQIRASGGLLAVLENERIIDTLELNESGSASIAIDC
ICEISLDKFLKVDSAAHEALQIFQIDKHPSHMGIGRSKEGFSVFGTMNKCVTPMGRRLLR
SWFLRPILDLDNLNRRLDTISFFLSAEEIAVSLRETLKSVKDISCILKKFNSPSSISTSA
DWAAFLKSVCALLHISKIFEVGISGSLYEELKNLDLDIIERADFHISVDLAYVCELVIGV
TDVDRSKEKGYETIVKEGFCDELDELRQIYEGLPEFLGEVSALELARLPHMCRDKEIPSI
IYIHQIGYLMCIFNEKLDEEMLEKLQDYEFAFADEEGENGRFFYHTAKTRELDNLLGDIY
HKILDMERAIMRDLVSHILQLSVHVNKAVNFAAELDCILALALVARQNNYVRPNLTKEDV
IDIRNGRHVLQEITVGTFIPNDTKVSHEGRINIITGPNYSGKSIYIKQVALIVFLSHIGS
FVPADAATVGLTDRIFCAMGSKFMTAEQSTFMIDLHQVGMMLRHASPRSLCLLDEFGKGT
LTEDGIGLLGGTINHFVSCYDPPKVLVCTHLTEIFDNSCLLESDRIKCYTMSVLSPDKDC
ADVEDIVFLYRLVPGRAFLSYGLHCAQLAGLPHEVLKRAALILDTLKNDNQIERLRRDNV
IARDQQYKDAVEKFLAFDARKGDLLQFFEEIFPTQS

Transcript Sequence

Gene sequence data has not been registered.